Bank Reconciliation Issues (And Fixes That Actually Work)

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Bank reconciliation sounds simple. All you have to do is match the numbers, close the books, and move on. But in reality, a missing deposit or duplicated entry can stall the whole process.

Every finance team knows the pain of a bank reconciliation that won’t balance. A single mistake can lead to hours of backtracking. Worse, it can throw off your reports and affect your cash flow.

If left unchecked until the month-end closing, these errors can lead to bigger issues. Then, you'll end up burning through your resources just to keep your business afloat.

Let's explore real-world bank reconciliation problems and how to solve them. From simple fixes to automation strategies, we’ll share solutions that actually work.

We're here to help your finance team spend less time chasing discrepancies. By adopting these practices, you'll have more time to focus on growing your business.

Table of Contents

Why Bank Reconciliation Problems Are So Common

Struggling with bank reconciliation is not a sign that you’re doing everything wrong. Even the most meticulous finance teams run into unmatched records or timing delays.

These challenges show up in companies of all sizes and industries. Here’s why they tend to happen often:

Complex Transactions

In insurance, a single ACH transfer might include multiple policy payments or adjustments. This means there won’t always be a one-to-one match for your transactions.

Manual Processes

Inputting hundreds of entries by hand takes up valuable time. And the more details you key in, the more room you leave for errors. Manual processes put the accuracy of your financial records at risk.

Different Data Sources

GL, claims systems, policy admin tools, and bank feeds have different formats. This makes it harder to comb through data sources to trace and verify each transaction.

Mismatched Timing

The bank records a deposit today; your policy system shows it tomorrow. The difference in timing causes discrepancies. It also makes it harder for you to flag errors early on.

Transactions move through many steps before they reflect in your books. With several parts involved, it’s easy for things to go off-track and lead to issues that take hours to untangle.

Common Bank Reconciliation Problems (and How to Fix Them)

Bank reconciliation isn’t always smooth. Let’s look at the issues that show up most often and how you can fix them fast.

1. Data Entry Errors

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Manual entry leaves room for mistakes. Typos or inconsistent formats can distort key details like amounts, dates, and account codes.

Example: A claims payout is logged as $14,250, but the bank feed shows $14,520. There’s only one simple digit error, but it’s enough to cause a mismatch.

How to fix this:

  • Use automation to bring in data straight from your bank.
  • Set up instant alerts for mismatched entries.

2. Timing Differences

The timing between recording and bank clearing can vary. This is common with checks, ACH transfers, and weekend processing.

Example: A premium payment arrived on Friday. You recorded it in your system right away, but it only appeared in the bank on Monday. This delay creates an anomaly.

How to fix this:

  • Adjust your process to reflect expected posting delays.
  • Sync real-time bank data with your accounting or claims platform.

3. Duplicate Transactions

When payments are processed or imported more than once, duplicates appear in your records. This can happen with multiple imports, payment retries, or sync glitches between systems.

Example: An employer’s premium payment appears twice. The first one is from a manual CSV upload, and the second one is from an automatic bank sync. With manual reconciliation, this can easily go unnoticed and throw off your numbers.

How to fix this:

  • Add duplicate detection rules in your reconciliation software.
  • Reconcile often to catch and remove duplicates right away.

4. Unmatched Transactions

It’s difficult to match records when you have incomplete payment details. Missing receipts and unclear descriptions make it harder to know what goes where.

Example: A lump-sum deposit arrives from a broker, but it doesn’t have invoice numbers. This can take hours to figure out how to split and allocate the payments correctly.

How to fix this:

  • Use clear and consistent labels for all transactions.
  • Connect your GL, claims, and payment systems so references match automatically.

5. Currency Conversion Issues

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Exchange rates can change between when a transaction happens and when it’s settled. Manual conversions also increase the risk of mistakes.

Example: A reinsurer sends a payout in CAD. Manual conversion to USD caused a balance error due to the use of an outdated exchange rate.

How to fix this:

  • Use automated conversion tools linked to a single exchange rate source.
  • Document currency handling procedures to ensure consistency.

6. Split Transactions

Not all payments are one-to-one. A single deposit may cover many policies or invoices. In the same way, a claim payout may be split into several entries.

Example:

An employer sends one lump sum that covers 12 different group health policies. This transaction won’t match a single record. Plus, allocating this manually would take hours.

How to fix this:

  • Ask payers to include a detailed payment file showing each policy or claim the lump sum covers.
  • Use automation to allocate payments according to policy or invoice references.

7. Fraudulent or Unauthorized Transactions

Without regular monitoring, suspicious activity can go undetected. Spotting it too late also makes recovery more difficult.

Example: A series of unauthorized withdrawals were masked as policy changes. At the end of the month, you notice these small amounts piled up and cost you a significant amount.

How to fix this:

  • Reconcile daily or weekly, depending on how many transactions you handle.
  • Set up alerts so you can detect unusual transactions right away.

How to Avoid Recurring Problems in Bank Reconciliation

It’s nice to be able to solve reconciliation issues when they come up. But if you want to truly optimize your process, you need to make sure these problems don’t happen again.

To prevent recurring problems, you need to adopt the right practices. These include the following:

Standardize Your Process

Use a clear, documented procedure for every reconciliation cycle. No matter who is doing the work, the steps should be consistent and repeatable.

Map Your Chart of Accounts

Ensure every transaction type has a defined account code. This removes guesswork and keeps entries consistent across the team.

Stick to a Schedule

Frequent reconciliations mean fewer items to investigate each time. Do these checks daily, weekly, or monthly, depending on your transaction volume.

Train Your Team

Make sure your team members know how to spot issues as soon as they come up. Catching problems early prevents them from turning into something more difficult to solve.

Try incorporating these strategies into your daily operations. Then, watch how reconciliation becomes a lot less stressful.

Automation Can Solve Reconciliation Issues

Finance teams spend 20–50 hours per month on manual reconciliation. If we do the math, this means companies lose 30–75 business days per year matching records by hand.

The good news is that you don’t have to waste this much time doing bank reconciliation these days. Curious how top insurance teams handle bank reconciliation? They automate their process.

With automation, reconciliation becomes less about fixing mistakes and more about preventing them. Here’s what the right tools can do for you:

  • Fast matching. Compare and clear hundreds of transactions in seconds.
  • Immediate alerts. Flag anomalies as soon as they appear.
  • System integration. Pull data from your systems for easier matching.
  • Real-time updates. Keep your records accurate and synced with live financial data.

These features make the whole process faster and smoother. In fact, automation has led to a 37% reduction in the time and effort finance teams spend on reconciliation every month.

It’s about time you realize you can grow a lot faster by leveraging modern tools. The less time you spend doing manual work, the more time you can put into advancing your business.

Close with Confidence

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The best finance teams don’t wait for problems to surface. Instead, they design processes to avoid them.

Now that you understand bank recon problems in the real world, you can address them head-on. A clear and consistent process supported by the right tools keeps errors from piling up.

With automation handling most of the work, you can close the books faster. You'll also be more confident knowing that you’re getting it right every time.

Remember, every minute you save in reconciliation is a minute you can spend driving results for your business.

Ready to solve your reconciliation headaches for good? Explore how our automation solution can simplify your bank reconciliation process.